MSstats is an open-source R package for statistical relative quantification of proteins and peptides in global, targeted and data-independent proteomics. It provides workflows for
- detecting differentially abundant proteins for MS experiments with chromatography-based quantification, with complex designs,
- characterizing MS assays in terms of limit of blank and limit of detection (LOB/LOD),
- longitudinal monitoring of quality control and system suitability testing (SST).
For comments, please use this Google group.
More information about research in the Olga Vitek lab.
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